Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polymer-forming cytoskeletal protein | SALA_RS00130 | Not Available | - | 18852 - 19247 | 13413.0 |
| m23 family metallopeptidase | SALA_RS00135 | Not Available | - | 19249 - 20457 | 42357.9 |
| isoprenylcysteine carboxylmethyltransferase family protein | SALA_RS00140 | Not Available | + | 20697 - 22094 | 51069.6 |
| tonb-dependent receptor | SALA_RS00145 | Not Available | - | 22212 - 24476 | 80884.1 |
| pepsy domain-containing protein | SALA_RS00150 | Not Available | - | 24779 - 25864 | 39678.7 |
| tonb-dependent receptor | SALA_RS00155 | Not Available | - | 25868 - 28018 | 76388.6 |
| patatin-like protein | SALA_RS00160 | O06342 | + | 28222 - 30534 | 84236.9 |
| 30s ribosomal protein s16 | SALA_RS17700 | Not Available | + | 30590 - 30703 | 3665.38 |
| dj-1/pfpi family protein | SALA_RS00165 | Q8G9F9 | - | 30847 - 31545 | 23656.4 |
| hypothetical protein | SALA_RS00170 | Not Available | - | 31690 - 31890 | 6459.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.