Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mbca/pars/xre antitoxin family protein | SALA_RS02185 | P55587 | - | 444457 - 444870 | 15328.5 |
| strawberry notch c-terminal domain-containing protein | SALA_RS02190 | F4IF36 | - | 444934 - 446841 | 70590.1 |
| tyrosine-type recombinase/integrase | SALA_RS02195 | P55634 | + | 446826 - 448373 | 58225.1 |
| tyrosine-type recombinase/integrase | SALA_RS02200 | Not Available | + | 448367 - 449281 | 34054.9 |
| tyrosine-type recombinase/integrase | SALA_RS02205 | P55636 | + | 449278 - 450282 | 37662.1 |
| strawberry notch-like ntp hydrolase domain-containing protein | SALA_RS02210 | Q5F371 | - | 450421 - 452895 | 88702.8 |
| toprim domain-containing protein | SALA_RS02215 | Not Available | - | 452936 - 453865 | 33528.4 |
| lytic transglycosylase domain-containing protein | SALA_RS02220 | O64046 | + | 453990 - 454646 | 23488.2 |
| phage integrase central domain-containing protein | SALA_RS02225 | P32053 | - | 454701 - 455954 | 47510.6 |
| Trna-met | Not Available | Not Available | + | 456132 - 456208 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.