Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yfdx family protein | SALA_RS02050 | Not Available | + | 419189 - 420106 | 32165.1 |
| hded family acid-resistance protein | SALA_RS02055 | Not Available | + | 420204 - 420824 | 22240.3 |
| hypothetical protein | SALA_RS02060 | Not Available | + | 420935 - 421555 | 22935.9 |
| nadh dehydrogenase ubiquinone fe-s protein 4 | SALA_RS02065 | Not Available | + | 421590 - 422132 | 20609.9 |
| mechanosensitive ion channel family protein | SALA_RS02070 | Not Available | + | 422172 - 422810 | 23082.3 |
| mechanosensitive ion channel family protein | SALA_RS17045 | Not Available | + | 422782 - 423096 | 11550.0 |
| phosphate-starvation-inducible psie family protein | SALA_RS02075 | Not Available | + | 423093 - 423605 | 18884.6 |
| 30s ribosomal protein s16 | SALA_RS16620 | Q2NBL8 | - | 423702 - 424010 | 10719.7 |
| 30s ribosomal protein s16 | SALA_RS02080 | Not Available | + | 424080 - 424331 | 9048.97 |
| is21 family transposase | SALA_RS02085 | Not Available | + | 424443 - 425963 | 57634.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.