Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is66 family transposase | SALA_RS02000 | P50360 | + | 408303 - 409858 | 58315.1 |
| 30s ribosomal protein s16 | SALA_RS17040 | Not Available | + | 409928 - 410056 | 4804.15 |
| nucleotide exchange factor grpe | SALA_RS02010 | Q3IYI4 | - | 410461 - 410997 | 18621.9 |
| molecular chaperone dnak | SALA_RS02015 | Q2G6N0 | - | 411015 - 412946 | 69202.6 |
| sensor histidine kinase kdpd | SALA_RS02020 | Not Available | - | 413007 - 413768 | 27491.0 |
| dnaj c-terminal domain-containing protein | SALA_RS02025 | Q88DH7 | - | 413875 - 414807 | 33984.1 |
| thioredoxin trxc | SALA_RS02030 | P0AGG6 | - | 414851 - 415291 | 15908.3 |
| atp-dependent chaperone clpb | SALA_RS02035 | Q98G96 | - | 415330 - 417918 | 95308.0 |
| 30s ribosomal protein s16 | SALA_RS02040 | Not Available | - | 418042 - 418407 | 13875.0 |
| duf5335 domain-containing protein | SALA_RS02045 | O67237 | + | 418796 - 419134 | 12587.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.