Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hsp20/alpha crystallin family protein | SALA_RS01950 | Not Available | - | 402828 - 403220 | 14289.8 |
| hsp20/alpha crystallin family protein | SALA_RS01955 | Not Available | - | 403230 - 403655 | 15548.8 |
| yfdx family protein | SALA_RS16375 | Not Available | - | 403869 - 404249 | 13746.5 |
| 30s ribosomal protein s16 | SALA_RS01965 | Not Available | + | 404256 - 404606 | 13319.2 |
| crp/fnr family transcriptional regulator | SALA_RS16610 | Not Available | + | 404489 - 405199 | 26043.6 |
| dps family protein | SALA_RS01975 | P73321 | + | 405493 - 405960 | 17304.9 |
| helix-turn-helix domain-containing protein | SALA_RS17710 | Not Available | - | 406049 - 406216 | 6003.4 |
| is110 family transposase | SALA_RS17430 | Q45968 | + | 406261 - 407373 | 40056.6 |
| is66-like element accessory protein tnpa | SALA_RS01990 | Not Available | + | 407422 - 407781 | 12960.5 |
| is66 family insertion sequence element accessory protein tnpb | SALA_RS01995 | P50359 | + | 407787 - 408224 | 16020.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.