Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1428 domain-containing protein | SALA_RS17410 | Not Available | - | 11093 - 11500 | 15112.7 |
| 30s ribosomal protein s16 | SALA_RS17415 | P0AAQ8 | - | 11519 - 11815 | 11151.1 |
| glutathione s-transferase family protein | SALA_RS00090 | Not Available | - | 11849 - 12520 | 24990.0 |
| alpha/beta fold hydrolase | SALA_RS00095 | D5VGV3 | - | 12546 - 13529 | 34232.4 |
| duf4287 domain-containing protein | SALA_RS00100 | Not Available | - | 13559 - 13777 | 7547.97 |
| voc family protein | SALA_RS00105 | Not Available | - | 13851 - 14285 | 15566.4 |
| tetr/acrr family transcriptional regulator | SALA_RS00110 | Not Available | - | 14357 - 15043 | 24168.7 |
| yifb family mg chelatase-like aaa atpase | SALA_RS00115 | P57015 | + | 15206 - 16714 | 52021.2 |
| duf1905 domain-containing protein | SALA_RS00120 | Not Available | + | 16724 - 17023 | 10511.7 |
| ggdef domain-containing protein | SALA_RS00125 | P75908 | + | 17078 - 18832 | 62975.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.