Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | SALA_RS01665 | Q1GWB6 | - | 337887 - 338903 | 36315.9 |
| gfa family protein | SALA_RS01670 | Not Available | - | 339108 - 339512 | 15095.6 |
| holliday junction branch migration protein ruva | SALA_RS01675 | Q1GWB4 | - | 339509 - 340108 | 19832.9 |
| crossover junction endodeoxyribonuclease ruvc | SALA_RS01680 | Q1GWB3 | - | 340421 - 340891 | 16076.8 |
| yebc/pmpr family dna-binding transcriptional regulator | SALA_RS01685 | Q1GWB2 | - | 341031 - 341777 | 26568.9 |
| ybjq family protein | SALA_RS01690 | Q1GWB1 | - | 341949 - 342266 | 11020.2 |
| duf2312 domain-containing protein | SALA_RS01695 | A6UCY0 | - | 342320 - 342562 | 9406.27 |
| duf1244 domain-containing protein | SALA_RS01700 | Not Available | - | 342618 - 342947 | 12050.3 |
| pyruvate kinase | SALA_RS01705 | O05118 | + | 343046 - 344500 | 51581.6 |
| arginyltransferase | SALA_RS01710 | Q1GWA7 | + | 344728 - 345501 | 28584.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.