Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspl | SALA_RS01615 | Not Available | + | 329972 - 331117 | 39522.2 |
| type ii secretion system protein gspm | SALA_RS01620 | Not Available | + | 331114 - 331596 | 16843.3 |
| type ii secretion system protein n | SALA_RS01625 | Not Available | + | 331593 - 332309 | 24459.9 |
| a24 family peptidase | SALA_RS01630 | P45794 | + | 332423 - 333205 | 27477.6 |
| peptidoglycan-associated lipoprotein pal | SALA_RS01635 | Q926C3 | - | 333192 - 333704 | 18237.3 |
| tol-pal system beta propeller repeat protein tolb | SALA_RS01640 | Q1GWC1 | - | 333811 - 335175 | 49029.1 |
| hypothetical protein | SALA_RS01645 | Not Available | - | 335181 - 336002 | 29171.6 |
| protein tolr | SALA_RS01650 | Q05606 | - | 336012 - 336533 | 18426.2 |
| protein tolq | SALA_RS01655 | P50598 | - | 336533 - 337231 | 24901.2 |
| ybgc/fadm family acyl-coa thioesterase | SALA_RS01660 | P44679 | - | 337225 - 337704 | 17697.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.