Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor domain-containing protein | SALA_RS01565 | Not Available | + | 318409 - 321102 | 98362.8 |
| type ii secretion system protein n | SALA_RS01570 | Not Available | + | 321266 - 322132 | 29179.3 |
| type ii secretion system secretin gspd | SALA_RS01575 | E3PJ86 | + | 322138 - 324336 | 76677.2 |
| gspe/pule family protein | SALA_RS01580 | Q00512 | + | 324333 - 325826 | 52743.5 |
| type ii secretion system inner membrane protein gspf | SALA_RS01585 | Q00513 | + | 325819 - 327036 | 43766.2 |
| type ii secretion system major pseudopilin gspg | SALA_RS01590 | Q00514 | + | 327049 - 327531 | 17670.3 |
| gsph/fimt family pseudopilin | SALA_RS01595 | Not Available | + | 327506 - 327994 | 17351.9 |
| type ii secretion system minor pseudopilin gspi | SALA_RS01600 | Q00516 | + | 327984 - 328361 | 13257.1 |
| type ii secretion system minor pseudopilin gspj | SALA_RS01605 | Q00517 | + | 328358 - 328969 | 21525.8 |
| type ii secretion system minor pseudopilin gspk | SALA_RS01610 | P31706 | + | 328966 - 329970 | 35112.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.