Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase formation protein hypd | SALA_RS16295 | P26411 | + | 20208 - 21341 | 41196.9 |
| hydrogenase expression/formation protein hype | SALA_RS16300 | P26412 | + | 21338 - 22387 | 36515.1 |
| high frequency lysogenization protein hfld | SALA_RS16305 | Q07404 | + | 22403 - 23122 | 25014.0 |
| hydrogenase maturation nickel metallochaperone hypa | SALA_RS16310 | Q9EYH3 | + | 23122 - 23364 | 8984.77 |
| hydrogenase nickel incorporation protein hypb | SALA_RS16315 | P28155 | + | 23364 - 24275 | 32805.3 |
| alpa family transcriptional regulator | SALA_RS16320 | Not Available | + | 24760 - 24966 | 7822.29 |
| helix-turn-helix domain-containing protein | SALA_RS16325 | Not Available | + | 24963 - 25157 | 7118.78 |
| phage integrase central domain-containing protein | SALA_RS17740 | Not Available | + | 25742 - 26143 | 14661.9 |
| class i adenylate-forming enzyme family protein | SALA_RS16335 | B9J2F2 | - | 26638 - 28125 | 53871.8 |
| maoc family dehydratase n-terminal domain-containing protein | SALA_RS16340 | Not Available | + | 28202 - 28543 | 12741.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.