Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation protease | SALA_RS16245 | Not Available | + | 12487 - 12972 | 16764.0 |
| hypothetical protein | SALA_RS16250 | Not Available | + | 12976 - 13287 | 10774.8 |
| hypothetical protein | SALA_RS16255 | Not Available | + | 13385 - 14383 | 35855.6 |
| hypothetical protein | SALA_RS16260 | Not Available | + | 14390 - 14602 | 6732.79 |
| hypothetical protein | SALA_RS16265 | Not Available | + | 14614 - 14835 | 7752.77 |
| nifu family protein | SALA_RS16270 | Not Available | + | 14840 - 15706 | 30864.7 |
| nhl repeat containing protein | SALA_RS16275 | Not Available | + | 15703 - 16881 | 41734.0 |
| carbamoyltransferase hypf | SALA_RS16280 | Q02987 | + | 16863 - 19244 | 86067.2 |
| hypc/hybg/hupf family hydrogenase formation chaperone | SALA_RS16285 | P40428 | + | 19235 - 19531 | 10431.6 |
| sis domain-containing protein | SALA_RS16290 | Q8KAW3 | + | 19528 - 20211 | 23685.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.