Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf6118 family protein | SALA_RS16195 | Not Available | - | 1028 - 1795 | 28482.0 |
| ti-type conjugative transfer relaxase traa | SALA_RS16200 | P55418 | - | 1803 - 4688 | 106266.0 |
| conjugal transfer protein trad | SALA_RS16205 | Not Available | + | 4862 - 5167 | 10751.7 |
| conjugal transfer protein trad | SALA_RS16210 | Not Available | + | 5190 - 5417 | 8473.21 |
| duf3422 family protein | SALA_RS16215 | Not Available | + | 5726 - 6991 | 46513.6 |
| sigma-54 dependent transcriptional regulator | SALA_RS16220 | P31908 | + | 7141 - 8589 | 53502.2 |
| hydrogenase | SALA_RS16225 | P12943 | + | 9081 - 10043 | 34382.3 |
| nickel-dependent hydrogenase large subunit | SALA_RS16230 | P13065 | + | 10057 - 11700 | 61324.3 |
| hypothetical protein | SALA_RS16235 | Not Available | + | 11790 - 12170 | 15045.8 |
| hypothetical protein | SALA_RS16240 | Not Available | + | 12182 - 12499 | 11818.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.