Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hesa/moeb/thif family protein | SALA_RS16145 | D4GSF3 | - | 3337962 - 3338711 | 25941.4 |
| dutp diphosphatase | SALA_RS16150 | A5VG00 | - | 3338711 - 3339259 | 18760.3 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | SALA_RS16155 | Q8DDX8 | - | 3339222 - 3340484 | 44324.5 |
| ccdb family protein | SALA_RS16160 | Not Available | - | 3340488 - 3340784 | 10719.3 |
| type ii toxin-antitoxin system ccda family antitoxin | SALA_RS16165 | Not Available | - | 3340785 - 3341030 | 9338.95 |
| 2-polyprenylphenol 6-hydroxylase | SALA_RS16170 | B1XWR5 | - | 3341075 - 3342619 | 57159.0 |
| class i sam-dependent methyltransferase | SALA_RS16175 | Q9X3X2 | - | 3342744 - 3343481 | 27048.5 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | SALA_RS16180 | Q1GN82 | + | 3343577 - 3344389 | 29231.4 |
| 30s ribosomal protein s20 | SALA_RS16185 | Q1GN81 | + | 3344579 - 3344842 | 9376.56 |
| phytanoyl-coa dioxygenase family protein | SALA_RS16990 | Not Available | - | 290 - 970 | 24064.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.