Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin domain-containing protein | SALA_RS16095 | Not Available | - | 3323233 - 3324840 | 56333.0 |
| m48 family metalloprotease | SALA_RS16100 | Not Available | - | 3324897 - 3326300 | 50453.5 |
| ribonuclease e/g | SALA_RS16105 | P44443 | - | 3326431 - 3329043 | 95411.7 |
| n-acetylmuramoyl-l-alanine amidase | SALA_RS16110 | Q9K0V3 | + | 3329511 - 3330578 | 38928.8 |
| d-arabinono-1,4-lactone oxidase | SALA_RS16115 | P9WIT2 | + | 3330613 - 3331866 | 46622.9 |
| dsd1 family plp-dependent enzyme | SALA_RS16120 | A1B8Z1 | + | 3331863 - 3333008 | 39698.5 |
| penicillin-binding protein 1a | SALA_RS16125 | Q1RKC5 | + | 3333073 - 3335589 | 92498.6 |
| peptide chain release factor 2 | SALA_RS16130 | Q2W3F8 | + | 3335668 - 3336795 | 41452.8 |
| class i sam-dependent methyltransferase | SALA_RS16135 | Not Available | + | 3336795 - 3337514 | 26222.2 |
| dsre family protein | SALA_RS16140 | Not Available | - | 3337609 - 3337974 | 12068.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.