Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m3 family metallopeptidase | SALA_RS16045 | P24171 | + | 3309753 - 3311939 | 81750.9 |
| ydei family protein | SALA_RS16050 | Not Available | - | 3312213 - 3312830 | 22821.3 |
| voc family protein | SALA_RS16055 | Not Available | - | 3312867 - 3313274 | 14657.4 |
| crp/fnr family transcriptional regulator | SALA_RS16060 | Not Available | - | 3313383 - 3313982 | 22909.6 |
| tetr/acrr family transcriptional regulator | SALA_RS16065 | Q9L4K2 | - | 3314006 - 3314614 | 20991.0 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | SALA_RS16070 | P0ABR8 | + | 3314648 - 3315829 | 45010.4 |
| nad(p)/fad-dependent oxidoreductase | SALA_RS16075 | Q8N2H3 | + | 3315826 - 3317445 | 57939.5 |
| amino acid permease | SALA_RS16080 | Q8ZGS9 | - | 3317407 - 3318717 | 45569.6 |
| tonb-dependent receptor | SALA_RS16085 | Not Available | - | 3318722 - 3321109 | 87225.0 |
| sulfotransferase | SALA_RS16090 | O67178 | - | 3321409 - 3323223 | 65059.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.