Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nicotinamide riboside transporter pnuc | SALA_RS15895 | Not Available | - | 3283344 - 3283913 | 21053.6 |
| phytoene/squalene synthase family protein | SALA_RS15900 | P22872 | - | 3283910 - 3284893 | 35915.3 |
| tigr00730 family rossman fold protein | SALA_RS15905 | P48636 | - | 3284893 - 3285474 | 20676.1 |
| phytoene desaturase | SALA_RS15910 | P54978 | - | 3285510 - 3286988 | 53571.6 |
| lycopene beta-cyclase crty | SALA_RS15915 | P21687 | - | 3286985 - 3288142 | 42450.2 |
| sterol desaturase family protein | SALA_RS15920 | Not Available | + | 3288216 - 3288977 | 28330.7 |
| duf2141 domain-containing protein | SALA_RS15925 | Not Available | + | 3288943 - 3289332 | 13713.5 |
| apolipoprotein n-acyltransferase | SALA_RS15930 | P61036 | + | 3289366 - 3291087 | 61295.3 |
| methionine adenosyltransferase | SALA_RS15935 | Q1GND0 | + | 3291137 - 3292357 | 44101.9 |
| trna (guanosine(46)-n(7))-methyltransferase trmb | SALA_RS15940 | Q1GNC9 | + | 3292440 - 3293153 | 26943.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.