Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marc family protein | SALA_RS15755 | Q59071 | + | 3248095 - 3248724 | 22277.2 |
| hypothetical protein | SALA_RS17690 | Not Available | - | 3248841 - 3249098 | 9178.28 |
| ompa family protein | SALA_RS15760 | Not Available | - | 3249126 - 3249815 | 24135.6 |
| hemolysin family protein | SALA_RS15765 | P74409 | + | 3250034 - 3251356 | 47457.6 |
| hypothetical protein | SALA_RS15770 | Not Available | - | 3251365 - 3251928 | 19815.0 |
| phosphoribosylamine--glycine ligase | SALA_RS15775 | Q986A5 | - | 3252053 - 3253330 | 44105.9 |
| exodeoxyribonuclease vii large subunit | SALA_RS15780 | Q2N6Q7 | + | 3253329 - 3254756 | 50382.7 |
| duf2093 domain-containing protein | SALA_RS15785 | Not Available | + | 3254834 - 3255046 | 7551.07 |
| m23 family metallopeptidase | SALA_RS15790 | Not Available | + | 3255043 - 3255954 | 32064.4 |
| tonb-dependent receptor domain-containing protein | SALA_RS15795 | Not Available | + | 3256229 - 3259291 | 108433.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.