Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-lyase | SALA_RS15560 | Not Available | - | 3209390 - 3210592 | 42552.1 |
| chromate efflux transporter | SALA_RS15565 | P14285 | - | 3210613 - 3211962 | 47689.6 |
| 3-mercaptopyruvate sulfurtransferase | SALA_RS15570 | Q99J99 | - | 3212114 - 3212953 | 29881.2 |
| hypothetical protein | SALA_RS15575 | Not Available | - | 3213138 - 3214430 | 43732.9 |
| preq(1) synthase | SALA_RS15580 | Q2G586 | + | 3214550 - 3215020 | 17134.4 |
| thioesterase family protein | SALA_RS15585 | Not Available | + | 3215066 - 3215476 | 15141.1 |
| hypothetical protein | SALA_RS17685 | Not Available | - | 3215487 - 3215744 | 9140.22 |
| is5 family transposase | SALA_RS15590 | P50358 | - | 3215778 - 3216538 | 28745.7 |
| hypothetical protein | SALA_RS15595 | Not Available | - | 3216609 - 3216848 | 8329.96 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | SALA_RS15600 | Q6NYL3 | - | 3217026 - 3219059 | 72957.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.