Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | SALA_RS15460 | Not Available | - | 3186402 - 3186806 | 14110.1 |
| polysaccharide lyase family 1 protein | SALA_RS15465 | Not Available | - | 3186803 - 3188182 | 49294.8 |
| tonb-dependent receptor | SALA_RS15470 | Not Available | + | 3188443 - 3191238 | 101777.0 |
| family 43 glycosylhydrolase | SALA_RS15475 | A7LXU0 | + | 3191320 - 3192933 | 59018.4 |
| uxaa family hydrolase | SALA_RS15480 | P42604 | - | 3192930 - 3194408 | 50963.9 |
| 2-keto-4-pentenoate hydratase | SALA_RS15485 | Not Available | + | 3194476 - 3195258 | 27393.7 |
| mfs transporter | SALA_RS15490 | P0AA79 | + | 3195281 - 3196588 | 47372.6 |
| glucuronate isomerase | SALA_RS15495 | Q1GNM2 | + | 3196593 - 3198005 | 52411.4 |
| mannitol dehydrogenase family protein | SALA_RS15500 | P39160 | + | 3198002 - 3199330 | 46526.1 |
| lysr family transcriptional regulator | SALA_RS15505 | Not Available | - | 3199432 - 3200319 | 31613.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.