Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | SALA_RS15410 | Not Available | + | 3174203 - 3176962 | 98172.1 |
| succinate dehydrogenase, cytochrome b556 subunit | SALA_RS15415 | Not Available | + | 3177200 - 3177643 | 15917.3 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | SALA_RS15420 | Not Available | + | 3177636 - 3178040 | 14447.1 |
| succinate dehydrogenase flavoprotein subunit | SALA_RS15425 | Q59661 | + | 3178042 - 3179856 | 65533.4 |
| laci family dna-binding transcriptional regulator | SALA_RS15430 | Q9JMQ1 | - | 3180084 - 3181139 | 37601.2 |
| rpib/laca/lacb family sugar-phosphate isomerase | SALA_RS15435 | Not Available | + | 3181350 - 3182003 | 23222.9 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | SALA_RS15440 | P37769 | + | 3182005 - 3182760 | 26092.2 |
| sugar kinase | SALA_RS15445 | Q53W83 | + | 3182891 - 3183901 | 34770.3 |
| carboxylesterase/lipase family protein | SALA_RS15450 | P37967 | + | 3183888 - 3185327 | 51546.7 |
| alpha/beta hydrolase | SALA_RS15455 | Not Available | - | 3185434 - 3186405 | 34713.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.