Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | SALA_RS15360 | Not Available | - | 3162330 - 3163361 | 36141.8 |
| lps assembly lipoprotein lpte | SALA_RS15365 | Not Available | - | 3163358 - 3163906 | 18652.1 |
| leucine--trna ligase | SALA_RS15370 | Q1GNP7 | - | 3164036 - 3166585 | 93678.7 |
| duf3576 domain-containing protein | SALA_RS15375 | Not Available | - | 3166639 - 3167100 | 16316.5 |
| hypothetical protein | SALA_RS15380 | Not Available | + | 3167376 - 3168092 | 25713.4 |
| thiamine phosphate synthase | SALA_RS15385 | Not Available | - | 3168065 - 3168691 | 22994.3 |
| yggs family pyridoxal phosphate-dependent enzyme | SALA_RS15390 | P24562 | + | 3168748 - 3169410 | 23515.4 |
| ligase-associated dna damage response dexh box helicase | SALA_RS15395 | Q57742 | + | 3169757 - 3172177 | 88312.3 |
| retroviral-like aspartic protease family protein | SALA_RS15400 | Not Available | + | 3172263 - 3173300 | 36920.9 |
| ligase-associated dna damage response endonuclease pdem | SALA_RS15405 | Not Available | + | 3173340 - 3174056 | 25308.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.