Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | SALA_RS15310 | O34421 | - | 3150547 - 3151710 | 41848.4 |
| aspartyl/asparaginyl beta-hydroxylase domain-containing protein | SALA_RS15315 | Not Available | - | 3151728 - 3152777 | 38322.5 |
| atp-dependent helicase | SALA_RS15320 | Q1RIP8 | - | 3152830 - 3155142 | 86372.7 |
| Trna-glu | Not Available | Not Available | + | 3155557 - 3155631 | Not Available |
| Trna-glu | Not Available | Not Available | + | 3155683 - 3155758 | Not Available |
| single-stranded-dna-specific exonuclease recj | SALA_RS15335 | P39693 | - | 3155863 - 3157629 | 60842.1 |
| ph domain-containing protein | SALA_RS15340 | Not Available | - | 3157626 - 3159140 | 54699.5 |
| ph domain-containing protein | SALA_RS17245 | Not Available | - | 3159137 - 3159667 | 19355.4 |
| alkyl/aryl-sulfatase | SALA_RS15350 | F2WP51 | - | 3159693 - 3161654 | 70457.6 |
| flavodoxin | SALA_RS15355 | Not Available | + | 3161717 - 3162205 | 16873.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.