Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase | SALA_RS15210 | Q2YN92 | - | 3131768 - 3132385 | 21427.5 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | SALA_RS15215 | P25539 | - | 3132395 - 3133339 | 32659.2 |
| hypothetical protein | SALA_RS15220 | Not Available | - | 3133374 - 3133838 | 17563.7 |
| thioesterase family protein | SALA_RS15225 | Not Available | - | 3134117 - 3134578 | 17349.3 |
| aminopeptidase p family protein | SALA_RS15230 | A1CAQ1 | - | 3134588 - 3136414 | 64799.7 |
| s9 family peptidase | SALA_RS15235 | O07834 | + | 3136497 - 3138644 | 79431.5 |
| serine hydrolase | SALA_RS15240 | P45460 | + | 3138741 - 3140180 | 50609.9 |
| had family phosphatase | SALA_RS15245 | Not Available | - | 3140165 - 3140776 | 22679.2 |
| type b 50s ribosomal protein l36 | SALA_RS15250 | A5VAZ8 | - | 3140874 - 3140999 | 5096.3 |
| rna polymerase factor sigma-54 | SALA_RS15255 | P30333 | - | 3141195 - 3142649 | 51895.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.