Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminobutyrate--2-oxoglutarate transaminase | SALA_RS15010 | O52250 | + | 3092431 - 3093738 | 46707.6 |
| ectoine synthase | SALA_RS15015 | Q1GNW6 | + | 3093755 - 3094168 | 15151.0 |
| ectoine hydroxylase | SALA_RS15020 | Q1GNW5 | + | 3094200 - 3095120 | 34141.4 |
| aspartate kinase | SALA_RS15025 | A4VFY3 | + | 3095117 - 3096559 | 52152.0 |
| mfs transporter | SALA_RS15030 | Not Available | + | 3096584 - 3097822 | 42636.2 |
| mfs transporter | SALA_RS15035 | P0C0L8 | + | 3097826 - 3099160 | 48217.9 |
| anti-sigma factor | SALA_RS15040 | Not Available | - | 3099168 - 3099875 | 24517.2 |
| rna polymerase sigma factor | SALA_RS15045 | Q7AKG9 | - | 3099872 - 3100360 | 18111.6 |
| s8 family serine peptidase | SALA_RS15050 | Not Available | + | 3100469 - 3101740 | 42791.1 |
| hypothetical protein | SALA_RS17385 | Not Available | + | 3101837 - 3102766 | 28902.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.