Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body-associated protein flil | SALA_RS14905 | Not Available | - | 3075082 - 3075687 | 21773.1 |
| flagellar hook-length control protein flik | SALA_RS14910 | Not Available | - | 3075705 - 3076955 | 41715.1 |
| hypothetical protein | SALA_RS14915 | Not Available | - | 3076952 - 3077398 | 16373.9 |
| flii/yscn family atpase | SALA_RS14920 | Q9I4N1 | - | 3077395 - 3078726 | 47254.3 |
| flih/sctl family protein | SALA_RS14925 | Not Available | - | 3078723 - 3079322 | 21178.8 |
| flagellar motor switch protein flig | SALA_RS14930 | P0ABZ3 | - | 3079315 - 3080346 | 36740.6 |
| flagellar basal-body ms-ring/collar protein flif | SALA_RS14935 | Q51463 | - | 3080339 - 3081994 | 57635.8 |
| flagellar hook-basal body complex protein flie | SALA_RS14940 | B3PEY6 | - | 3081998 - 3082351 | 12501.8 |
| flagellin | SALA_RS14945 | Q05203 | + | 3082603 - 3083421 | 27801.6 |
| 50s ribosomal protein l20 | SALA_RS14950 | Q1GNX8 | - | 3083620 - 3083985 | 13649.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.