Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | SALA_RS14855 | G3XCV0 | + | 3067483 - 3068550 | 38395.5 |
| flagellar protein flis | SALA_RS14860 | Not Available | - | 3068741 - 3069130 | 13960.7 |
| flagellar filament capping protein flid | SALA_RS14865 | Q9K3C5 | - | 3069156 - 3070526 | 47449.7 |
| flagellar type iii secretion system protein flhb | SALA_RS14870 | P76299 | - | 3070572 - 3071711 | 40333.5 |
| flagellar biosynthetic protein flir | SALA_RS14875 | P35537 | - | 3071715 - 3072494 | 26005.0 |
| flagellar biosynthetic protein fliq | SALA_RS14880 | O67774 | - | 3072499 - 3072768 | 9545.15 |
| flagellar type iii secretion system pore protein flip | SALA_RS14885 | O85133 | - | 3072781 - 3073551 | 27477.7 |
| flagellar biosynthetic protein flio | SALA_RS14890 | Not Available | - | 3073541 - 3073819 | 9949.45 |
| flagellar motor switch protein flin | SALA_RS14895 | Q51466 | - | 3073819 - 3074154 | 11571.8 |
| flim/flin family flagellar motor switch protein | SALA_RS14900 | Not Available | - | 3074147 - 3075085 | 32943.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.