Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | SALA_RS16580 | Not Available | - | 271425 - 271712 | 11301.4 |
| hypothetical protein | SALA_RS01360 | Not Available | - | 271719 - 272180 | 17021.1 |
| excinuclease abc subunit uvrb | SALA_RS01365 | Q56998 | - | 272384 - 274570 | 82110.9 |
| duf3617 domain-containing protein | SALA_RS01370 | Not Available | + | 274654 - 275166 | 17753.5 |
| voc family protein | SALA_RS01375 | Not Available | + | 275245 - 275643 | 14062.6 |
| m48 family metallopeptidase | SALA_RS01385 | Not Available | + | 276172 - 277917 | 63109.5 |
| acyl carrier protein | SALA_RS01390 | Q1GWG9 | + | 278152 - 278388 | 8457.84 |
| beta-ketoacyl-acp synthase ii | SALA_RS01395 | P56902 | + | 278556 - 279815 | 43975.6 |
| triacylglycerol lipase | SALA_RS01400 | Not Available | - | 280014 - 280763 | 27618.1 |
| pqq-dependent sugar dehydrogenase | SALA_RS01405 | P75804 | - | 280774 - 281949 | 41532.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.