Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | SALA_RS14510 | Q43914 | - | 3000580 - 3001278 | 25288.8 |
| duf6489 family protein | SALA_RS14515 | Not Available | + | 3001384 - 3001677 | 10462.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | SALA_RS14520 | Q1GP64 | + | 3001701 - 3003005 | 45303.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | SALA_RS14525 | Q1GP63 | + | 3003081 - 3004940 | 65876.4 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | SALA_RS14530 | Q1GP62 | + | 3004996 - 3005697 | 25591.9 |
| para family protein | SALA_RS14535 | P0CAV7 | + | 3005694 - 3006476 | 28146.1 |
| parb/repb/spo0j family partition protein | SALA_RS14540 | P0CAV8 | + | 3006477 - 3007436 | 33788.6 |
| duf4402 domain-containing protein | SALA_RS14545 | Not Available | + | 3007769 - 3008266 | 15994.8 |
| molecular chaperone | SALA_RS14550 | Not Available | + | 3008470 - 3009294 | 28814.9 |
| collagen binding domain-containing protein | SALA_RS14555 | Not Available | + | 3009326 - 3012124 | 100333.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.