Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphate pyrophosphatase | SALA_RS14460 | Q1GP76 | - | 2993535 - 2994131 | 21262.6 |
| pyruvate, water dikinase regulatory protein | SALA_RS14465 | Q1GP75 | - | 2994128 - 2994940 | 30023.1 |
| uroporphyrinogen decarboxylase | SALA_RS14470 | Q1GP74 | + | 2995278 - 2996306 | 36409.8 |
| copd family protein | SALA_RS14475 | Q9ZC85 | + | 2996308 - 2996757 | 17200.7 |
| transcription termination factor rho | SALA_RS14480 | P52156 | + | 2996954 - 2998210 | 46549.0 |
| terc family protein | SALA_RS14485 | O31603 | + | 2998233 - 2998955 | 25181.5 |
| hypothetical protein | SALA_RS14490 | Not Available | + | 2999079 - 2999324 | 9264.8 |
| hypothetical protein | SALA_RS14495 | Not Available | + | 2999311 - 2999733 | 15491.7 |
| duf1489 family protein | SALA_RS14500 | Not Available | + | 2999802 - 3000188 | 14360.3 |
| nuclear transport factor 2 family protein | SALA_RS14505 | Not Available | - | 3000185 - 3000583 | 14567.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.