Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | SALA_RS14410 | P94562 | - | 2986552 - 2987019 | 16955.4 |
| m14-type cytosolic carboxypeptidase | SALA_RS14415 | P30795 | - | 2987016 - 2988125 | 40958.0 |
| duf4136 domain-containing protein | SALA_RS14420 | Not Available | - | 2988122 - 2988748 | 21386.5 |
| cell wall hydrolase | SALA_RS14425 | Not Available | - | 2988820 - 2989485 | 23514.0 |
| duf1491 family protein | SALA_RS14430 | Not Available | - | 2989683 - 2990018 | 12396.8 |
| pts sugar transporter subunit iia | SALA_RS14435 | P30335 | - | 2990144 - 2990608 | 16357.8 |
| ribosome hibernation-promoting factor, hpf/yfia family | SALA_RS14440 | P30334 | - | 2990758 - 2991333 | 21030.6 |
| dna polymerase iii subunit epsilon | SALA_RS14445 | Q92GL1 | - | 2991379 - 2992074 | 25472.6 |
| dephospho-coa kinase | SALA_RS14450 | Q2GC60 | - | 2992094 - 2992717 | 22930.4 |
| shikimate dehydrogenase | SALA_RS14455 | Q1GP77 | - | 2992714 - 2993538 | 28584.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.