Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | SALA_RS14360 | Q1GP96 | - | 2974972 - 2977065 | 76704.5 |
| 30s ribosomal protein s7 | SALA_RS14365 | Q1GP95 | - | 2977162 - 2977632 | 17695.3 |
| 30s ribosomal protein s12 | SALA_RS14370 | Q1GP94 | - | 2977710 - 2978081 | 13834.1 |
| isoaspartyl peptidase/l-asparaginase family protein | SALA_RS14375 | P37595 | - | 2978359 - 2979420 | 36359.6 |
| amidohydrolase family protein | SALA_RS14380 | Not Available | - | 2979464 - 2980765 | 44796.7 |
| s8 family peptidase | SALA_RS14385 | Not Available | - | 2980806 - 2983169 | 79915.5 |
| pyrimidine 5'-nucleotidase | SALA_RS14390 | Not Available | + | 2983634 - 2984311 | 25373.2 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | SALA_RS14395 | Q13F24 | + | 2984308 - 2985150 | 29157.9 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | SALA_RS14400 | Q1GP88 | - | 2985157 - 2985843 | 25289.0 |
| hsp20 family protein | SALA_RS14405 | P70918 | + | 2986033 - 2986491 | 17010.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.