Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yran family protein | SALA_RS01305 | Q1GWI7 | - | 263409 - 263759 | 13606.8 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | SALA_RS01310 | Q2NAK3 | - | 263756 - 264616 | 29730.8 |
| penicillin-binding protein activator | SALA_RS01315 | Not Available | + | 264627 - 265829 | 41490.5 |
| translation initiation factor if-3 | SALA_RS01320 | Q5NL80 | + | 266001 - 266537 | 20220.7 |
| nrde family protein | SALA_RS01325 | Not Available | - | 266656 - 267354 | 24445.1 |
| duf4287 domain-containing protein | SALA_RS01330 | Not Available | + | 267452 - 268006 | 19907.6 |
| tetr/acrr family transcriptional regulator | SALA_RS01335 | Not Available | + | 268018 - 268626 | 22453.9 |
| hypothetical protein | SALA_RS01340 | Not Available | + | 268649 - 269086 | 15937.8 |
| s10 family peptidase | SALA_RS01345 | Not Available | - | 269295 - 270797 | 54807.6 |
| higa family addiction module antitoxin | SALA_RS01355 | Not Available | - | 271136 - 271456 | 11780.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.