Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | SALA_RS14115 | Q44333 | + | 2930896 - 2931366 | 17710.6 |
| Trna-gly | Not Available | Not Available | + | 2931415 - 2931488 | Not Available |
| transglutaminase family protein | SALA_RS14125 | Not Available | - | 2931531 - 2932259 | 26548.5 |
| tetracycline resistance mfs efflux pump | SALA_RS14130 | P02982 | + | 2932398 - 2933636 | 43396.2 |
| molybdopterin-binding protein | SALA_RS14135 | A3MS85 | - | 2933609 - 2934370 | 26885.3 |
| glutathione s-transferase family protein | SALA_RS14140 | Not Available | + | 2934474 - 2935109 | 22889.3 |
| imua family protein | SALA_RS17230 | Not Available | + | 2935391 - 2936191 | 27292.7 |
| dna polymerase y family protein | SALA_RS14150 | Q9A3J2 | + | 2936082 - 2937632 | 56340.0 |
| error-prone dna polymerase | SALA_RS14155 | Q139V1 | + | 2937629 - 2940907 | 122912.0 |
| hypothetical protein | SALA_RS17235 | Not Available | + | 2940946 - 2941230 | 10329.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.