Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide assembly protein lapb | SALA_RS17380 | Not Available | + | 2913020 - 2913925 | 31824.9 |
| tetratricopeptide repeat protein | SALA_RS14070 | Not Available | + | 2913976 - 2914812 | 29715.2 |
| prepilin peptidase | SALA_RS16515 | Not Available | + | 2914805 - 2915296 | 17568.2 |
| lvivd | SALA_RS14080 | Not Available | - | 2915374 - 2919666 | 157510.0 |
| hypothetical protein | SALA_RS14085 | Not Available | - | 2919674 - 2921599 | 71290.7 |
| heme-binding protein | SALA_RS14090 | Not Available | - | 2921603 - 2923576 | 66422.3 |
| multiheme c-type cytochrome | SALA_RS14095 | Not Available | - | 2923581 - 2925014 | 50542.8 |
| nadp-specific glutamate dehydrogenase | SALA_RS14100 | P94598 | - | 2925064 - 2926419 | 48891.3 |
| tetratricopeptide repeat protein | SALA_RS14105 | Not Available | + | 2926565 - 2927515 | 32874.4 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | SALA_RS14110 | O52485 | - | 2927701 - 2930796 | 108790.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.