Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor domain-containing protein | SALA_RS13965 | Not Available | + | 2892898 - 2896083 | 115100.0 |
| endonuclease iii | SALA_RS13970 | P0AB84 | - | 2896124 - 2896792 | 24621.0 |
| hypothetical protein | SALA_RS13975 | Not Available | + | 2897026 - 2897469 | 16405.2 |
| 4-hydroxy-tetrahydrodipicolinate reductase | SALA_RS13980 | Q5NPM9 | - | 2897516 - 2898241 | 25006.1 |
| nad-dependent deacylase | SALA_RS13985 | Q8D9J9 | + | 2898365 - 2899066 | 25814.6 |
| trna adenosine(34) deaminase tada | SALA_RS13990 | A9CK16 | - | 2899069 - 2899536 | 16544.9 |
| 50s ribosomal protein l28 | SALA_RS13995 | Q1GPG7 | + | 2899667 - 2899960 | 10645.9 |
| esterase-like activity of phytase family protein | SALA_RS14000 | Not Available | - | 2900000 - 2900998 | 36553.0 |
| glycine zipper 2tm domain-containing protein | SALA_RS14005 | Not Available | + | 2901318 - 2901719 | 14709.1 |
| ppx/gppa phosphatase family protein | SALA_RS14010 | P54882 | + | 2901908 - 2902999 | 39223.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.