Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| urate hydroxylase puud | SALA_RS13915 | Not Available | + | 2880468 - 2881040 | 20912.3 |
| gamma carbonic anhydrase family protein | SALA_RS13920 | Q9FWR5 | - | 2881078 - 2881632 | 19522.8 |
| spermidine synthase | SALA_RS13925 | Not Available | - | 2881629 - 2883887 | 81183.5 |
| porphobilinogen synthase | SALA_RS13930 | P45622 | - | 2883892 - 2884890 | 35573.3 |
| m23 family metallopeptidase | SALA_RS13935 | P44693 | - | 2884970 - 2886514 | 54696.9 |
| helicase-related protein | SALA_RS13940 | O74727 | + | 2886787 - 2889549 | 99094.9 |
| rna-binding s4 domain-containing protein | SALA_RS13945 | Not Available | + | 2889557 - 2889907 | 12164.8 |
| ferredoxin fdxa | SALA_RS13950 | Q45972 | + | 2890022 - 2890360 | 12518.6 |
| atp-dependent clp protease proteolytic subunit | SALA_RS13955 | Q1GPH5 | + | 2890513 - 2891163 | 23815.8 |
| atp-dependent clp protease atp-binding subunit clpx | SALA_RS13960 | Q1GPH4 | + | 2891356 - 2892627 | 45806.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.