Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SALA_RS17225 | Not Available | + | 2870792 - 2870959 | 6358.74 |
| ompa family protein | SALA_RS13870 | Not Available | - | 2871052 - 2871936 | 31130.0 |
| ribosome maturation factor rimm | SALA_RS13875 | Q1GPJ1 | - | 2872140 - 2872631 | 17091.5 |
| 30s ribosomal protein s16 | SALA_RS13880 | A5V9P7 | - | 2872806 - 2873243 | 15548.2 |
| signal recognition particle protein | SALA_RS13885 | P0AGD9 | - | 2873285 - 2874739 | 50977.0 |
| bifunctional diguanylate cyclase/phosphodiesterase | SALA_RS13890 | Not Available | + | 2874989 - 2876620 | 59102.4 |
| diaminopimelate epimerase | SALA_RS13895 | Q1GPI7 | + | 2876673 - 2877479 | 28393.0 |
| miab/rimo family radical sam methylthiotransferase | SALA_RS13900 | Q9ZDB6 | + | 2877476 - 2878801 | 47074.5 |
| signal recognition particle-docking protein ftsy | SALA_RS13905 | A9CHH2 | + | 2878798 - 2879724 | 32756.7 |
| inner membrane-spanning protein ycib | SALA_RS13910 | P59363 | + | 2879721 - 2880389 | 24179.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.