Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | SALA_RS13820 | Q1GPK3 | - | 2861337 - 2862404 | 38475.8 |
| histidine--trna ligase | SALA_RS13825 | Q2GBN6 | - | 2862577 - 2863836 | 46139.7 |
| m61 family metallopeptidase | SALA_RS13830 | Not Available | + | 2864055 - 2865995 | 71926.1 |
| duf2238 domain-containing protein | SALA_RS13835 | Not Available | - | 2865992 - 2866621 | 22605.7 |
| aspartate-semialdehyde dehydrogenase | SALA_RS13840 | O67716 | - | 2866731 - 2867756 | 37260.4 |
| 50s ribosomal protein l19 | SALA_RS13845 | Q1GPJ8 | - | 2867865 - 2868242 | 13912.8 |
| trna (guanosine(37)-n1)-methyltransferase trmd | SALA_RS13850 | Q1GPJ7 | - | 2868247 - 2868984 | 26543.8 |
| type ii toxin-antitoxin system vapc family toxin | SALA_RS13855 | Not Available | - | 2868981 - 2869358 | 13618.2 |
| hypothetical protein | SALA_RS13860 | Not Available | - | 2869355 - 2869720 | 13366.9 |
| lysr substrate-binding domain-containing protein | SALA_RS13865 | Not Available | - | 2869767 - 2870687 | 34183.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.