Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | + | 2851308 - 2851384 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 2851568 - 2853056 | Not Available |
| lipopolysaccharide biosynthesis protein | SALA_RS13780 | Not Available | + | 2853506 - 2855038 | 54623.3 |
| cbs domain-containing protein | SALA_RS13785 | P32987 | - | 2855023 - 2855448 | 15167.5 |
| hypothetical protein | SALA_RS13790 | Not Available | + | 2855573 - 2855875 | 10713.1 |
| acyl-coa thioesterase | SALA_RS13795 | P0A8Z1 | + | 2855872 - 2856264 | 14030.2 |
| duf4139 domain-containing protein | SALA_RS13800 | Not Available | - | 2856261 - 2857820 | 55859.2 |
| duf4139 domain-containing protein | SALA_RS13805 | Not Available | - | 2857831 - 2859255 | 50966.3 |
| duf4167 domain-containing protein | SALA_RS13810 | Not Available | - | 2859332 - 2860138 | 29829.1 |
| peptide chain release factor n(5)-glutamine methyltransferase | SALA_RS13815 | Q89XT8 | - | 2860411 - 2861235 | 28980.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.