Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | SALA_RS13725 | Not Available | - | 2842851 - 2845004 | 78431.1 |
| hypothetical protein | SALA_RS13730 | Not Available | - | 2845062 - 2845256 | 7415.09 |
| sigma-70 family rna polymerase sigma factor | SALA_RS13735 | P45215 | - | 2845253 - 2845861 | 22553.0 |
| nitrate/nitrite transporter nrts | SALA_RS13740 | Not Available | - | 2845862 - 2846059 | 6887.37 |
| fad-dependent oxidoreductase | SALA_RS13745 | Not Available | - | 2846086 - 2847210 | 39663.9 |
| Trna-met | Not Available | Not Available | + | 2847706 - 2847782 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 2847888 - 2848002 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 2848118 - 2850908 | Not Available |
| hypothetical protein | SALA_RS17220 | Not Available | + | 2850964 - 2851242 | 10033.9 |
| Trna-ala | Not Available | Not Available | + | 2851208 - 2851283 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.