Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein carrier protein lola | SALA_RS13575 | Not Available | + | 2816158 - 2816778 | 22732.3 |
| exodeoxyribonuclease iii | SALA_RS13580 | P23196 | + | 2817401 - 2818195 | 29716.5 |
| gtp cyclohydrolase ii | SALA_RS13585 | C5D3N0 | + | 2818357 - 2819259 | 31962.7 |
| lyttr family dna-binding domain-containing protein | SALA_RS13590 | Q9KL96 | - | 2819348 - 2820154 | 30351.4 |
| sensor histidine kinase | SALA_RS13595 | P0AD15 | - | 2820151 - 2821275 | 40854.1 |
| helix-turn-helix domain-containing protein | SALA_RS13600 | Not Available | - | 2821340 - 2821858 | 19223.4 |
| glycosyltransferase | SALA_RS13605 | P71054 | - | 2821944 - 2822855 | 33677.4 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | SALA_RS13610 | Q2YN11 | + | 2822955 - 2825048 | 77789.6 |
| duf692 family multinuclear iron-containing protein | SALA_RS17735 | Not Available | + | 2825053 - 2825421 | 13205.4 |
| doxx family protein | SALA_RS13620 | Not Available | + | 2825537 - 2826007 | 17571.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.