Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbe | SALA_RS13285 | Not Available | - | 2752264 - 2754753 | 90538.7 |
| virb3 family type iv secretion system protein | SALA_RS13290 | Not Available | - | 2754750 - 2755019 | 9682.95 |
| trbc/virb2 family protein | SALA_RS13295 | Not Available | - | 2755019 - 2755363 | 11651.5 |
| p-type conjugative transfer atpase trbb | SALA_RS13300 | P54907 | - | 2755360 - 2756343 | 34740.2 |
| fic family protein | SALA_RS13305 | Not Available | + | 2756756 - 2757862 | 41180.3 |
| ribbon-helix-helix protein, copg family | SALA_RS17725 | Not Available | - | 2757835 - 2758287 | 16891.9 |
| conjugal transfer protein trag | SALA_RS13315 | Q00185 | - | 2758284 - 2760347 | 75726.5 |
| duf3363 domain-containing protein | SALA_RS13320 | Not Available | - | 2760382 - 2762127 | 63600.5 |
| lytic transglycosylase domain-containing protein | SALA_RS13325 | O31608 | - | 2762372 - 2763097 | 25016.6 |
| duf736 domain-containing protein | SALA_RS13330 | Not Available | - | 2763164 - 2763508 | 12402.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.