Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthase-related protein | SALA_RS13240 | Not Available | - | 2743790 - 2745397 | 58305.5 |
| lasso peptide biosynthesis b2 protein | SALA_RS13245 | Not Available | - | 2745550 - 2746134 | 21233.7 |
| benenodin family lasso peptide | SALA_RS17205 | Not Available | - | 2746253 - 2746387 | 4747.56 |
| duf2274 domain-containing protein | SALA_RS13250 | Not Available | - | 2746688 - 2746924 | 8682.6 |
| trbi/virb10 family protein | SALA_RS13255 | P54917 | - | 2746924 - 2748216 | 44737.5 |
| p-type conjugative transfer protein trbg | SALA_RS13260 | Not Available | - | 2748213 - 2749226 | 37065.2 |
| conjugal transfer protein trbf | SALA_RS13265 | Not Available | - | 2749223 - 2749906 | 25280.9 |
| p-type conjugative transfer protein trbl | SALA_RS13270 | Not Available | - | 2749925 - 2751298 | 45076.6 |
| putative entry exclusion protein trbk-alt | SALA_RS13275 | Not Available | - | 2751295 - 2751543 | 9313.16 |
| p-type conjugative transfer protein trbj | SALA_RS13280 | Not Available | - | 2751545 - 2752267 | 25377.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.