Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m48 family metallopeptidase | SALA_RS01205 | Not Available | - | 246555 - 247547 | 34646.4 |
| cox15/ctaa family protein | SALA_RS01210 | Q1GWK6 | + | 247661 - 248728 | 38553.6 |
| 50s ribosomal protein l13 | SALA_RS01215 | Q11J65 | + | 248893 - 249372 | 17528.4 |
| 30s ribosomal protein s9 | SALA_RS01220 | B6JGT6 | + | 249372 - 249869 | 17859.5 |
| sdr family nad(p)-dependent oxidoreductase | SALA_RS01225 | Q6IAN0 | - | 249945 - 250763 | 28274.0 |
| card family transcriptional regulator | SALA_RS01230 | P9WJG2 | + | 251077 - 251604 | 19916.9 |
| trna pseudouridine(38-40) synthase trua | SALA_RS01235 | Q1GWK1 | - | 251833 - 252573 | 27273.6 |
| methionyl-trna formyltransferase | SALA_RS01240 | Q1GWK0 | - | 252742 - 253662 | 32574.7 |
| recombination mediator recr | SALA_RS01245 | Q1GWJ9 | + | 253889 - 254485 | 21373.9 |
| peptide deformylase | SALA_RS01250 | A5VDM3 | + | 254540 - 255073 | 20080.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.