Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| eexn family lipoprotein | SALA_RS13190 | Not Available | + | 2734080 - 2734379 | 10784.0 |
| pin domain-containing protein | SALA_RS13195 | Not Available | - | 2734387 - 2734776 | 13477.4 |
| abrb/maze/spovt family dna-binding domain-containing protein | SALA_RS13200 | Not Available | - | 2734773 - 2735018 | 8461.19 |
| hepn domain-containing protein | SALA_RS13205 | Not Available | + | 2735177 - 2736109 | 36234.5 |
| antitoxin | SALA_RS13210 | Not Available | + | 2736418 - 2736627 | 7775.42 |
| type ii toxin-antitoxin system vapc family toxin | SALA_RS13215 | Q4QLW0 | + | 2736631 - 2737032 | 14443.5 |
| rna polymerase sigma factor | SALA_RS16935 | Not Available | + | 2737261 - 2737926 | 24621.2 |
| fecr family protein | SALA_RS13225 | Not Available | + | 2737923 - 2739020 | 39540.9 |
| tonb-dependent receptor | SALA_RS13230 | Not Available | + | 2739135 - 2741705 | 91394.4 |
| atxe2 family lasso peptide isopeptidase | SALA_RS13235 | E8RUP5 | + | 2741705 - 2743831 | 78453.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.