Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heavy metal translocating p-type atpase | SALA_RS13135 | Q60048 | + | 2723815 - 2726307 | 87358.6 |
| tolc family outer membrane protein | SALA_RS13140 | Q8G0Y6 | + | 2726304 - 2727797 | 53086.9 |
| cation diffusion facilitator family transporter | SALA_RS13150 | P13512 | + | 2728043 - 2728981 | 33510.9 |
| zf-tfiib domain-containing protein | SALA_RS13155 | Not Available | + | 2729044 - 2729340 | 11142.1 |
| srpbcc domain-containing protein | SALA_RS13160 | Not Available | + | 2729377 - 2729862 | 18669.9 |
| hypothetical protein | SALA_RS13165 | Not Available | + | 2730040 - 2730453 | 14684.8 |
| luxr family transcriptional regulator | SALA_RS13170 | P55629 | + | 2731109 - 2731861 | 27856.4 |
| acyl-homoserine-lactone synthase | SALA_RS13175 | Not Available | + | 2731970 - 2732596 | 23683.4 |
| phytanoyl-coa dioxygenase family protein | SALA_RS13180 | A0A1E1FFL0 | + | 2732593 - 2733468 | 31878.2 |
| gntr family transcriptional regulator | SALA_RS13185 | Not Available | + | 2733473 - 2734087 | 22277.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.