Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cation transporter | SALA_RS13095 | Not Available | + | 2713165 - 2713815 | 22447.5 |
| universal stress protein | SALA_RS16930 | Not Available | - | 2713981 - 2714784 | 29263.6 |
| cation diffusion facilitator family transporter | SALA_RS13105 | Not Available | - | 2715028 - 2715654 | 21936.6 |
| hypothetical protein | SALA_RS17195 | Not Available | + | 2716403 - 2716738 | 11615.0 |
| tolc family protein | SALA_RS13110 | Not Available | + | 2716826 - 2718109 | 45116.6 |
| hypothetical protein | SALA_RS17200 | Not Available | + | 2718106 - 2718264 | 5418.53 |
| efflux rnd transporter periplasmic adaptor subunit | SALA_RS13115 | Not Available | + | 2718261 - 2719418 | 39698.1 |
| efflux rnd transporter permease subunit | SALA_RS13120 | Q44586 | + | 2719422 - 2722667 | 115740.0 |
| duf190 domain-containing protein | SALA_RS13125 | Not Available | + | 2722679 - 2723023 | 12647.3 |
| srpbcc domain-containing protein | SALA_RS13130 | Not Available | + | 2723156 - 2723623 | 18066.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.