Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mercuric transporter mert family protein | SALA_RS13050 | Not Available | + | 2702750 - 2703064 | 10920.7 |
| 30s ribosomal protein s16 | SALA_RS17670 | Not Available | + | 2703057 - 2703278 | 7910.49 |
| universal stress protein | SALA_RS13055 | Not Available | - | 2703483 - 2703974 | 17644.2 |
| hypothetical protein | SALA_RS17185 | Not Available | - | 2703950 - 2704294 | 12228.7 |
| hypothetical protein | SALA_RS17190 | Not Available | + | 2704601 - 2704936 | 11600.6 |
| tolc family protein | SALA_RS13065 | Not Available | + | 2704996 - 2706297 | 45125.4 |
| efflux rnd transporter periplasmic adaptor subunit | SALA_RS13070 | P37973 | + | 2706300 - 2707469 | 40037.7 |
| efflux rnd transporter permease subunit | SALA_RS13075 | Not Available | + | 2707471 - 2710707 | 115360.0 |
| had-iib family hydrolase | SALA_RS13085 | Not Available | - | 2711883 - 2712626 | 27104.3 |
| helix-turn-helix domain-containing protein | SALA_RS13090 | Q9X5X4 | - | 2712672 - 2713097 | 15369.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.