Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cu(i)-responsive transcriptional regulator | SALA_RS12955 | P58379 | - | 2681659 - 2682045 | 14342.1 |
| heavy metal translocating p-type atpase | SALA_RS12960 | Not Available | - | 2682042 - 2684405 | 82660.0 |
| duf411 domain-containing protein | SALA_RS12965 | Not Available | + | 2684629 - 2685075 | 15750.1 |
| hypothetical protein | SALA_RS12970 | Not Available | + | 2685204 - 2685479 | 9490.7 |
| hypothetical protein | SALA_RS12975 | Not Available | + | 2685583 - 2685858 | 9788.93 |
| tolc family protein | SALA_RS12980 | Not Available | + | 2685998 - 2687224 | 44276.7 |
| efflux rnd transporter periplasmic adaptor subunit | SALA_RS12985 | Q8CWA2 | + | 2687221 - 2688693 | 51773.4 |
| efflux rnd transporter permease subunit | SALA_RS12990 | Q9ZHC9 | + | 2688690 - 2691833 | 113246.0 |
| copper-binding protein | SALA_RS12995 | Not Available | + | 2691845 - 2692255 | 13887.8 |
| hypothetical protein | SALA_RS13000 | Not Available | - | 2692390 - 2692722 | 11877.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.