Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sos response-associated peptidase | SALA_RS12860 | Not Available | + | 2660821 - 2661471 | 24357.9 |
| luxr family transcriptional regulator | SALA_RS12865 | P0A3J5 | + | 2661727 - 2662488 | 28214.6 |
| acyl-homoserine-lactone synthase | SALA_RS12870 | Q6NCZ6 | + | 2662586 - 2663212 | 23206.6 |
| phytanoyl-coa dioxygenase family protein | SALA_RS12875 | A0A0U5GHG9 | + | 2663209 - 2664087 | 31965.3 |
| gntr family transcriptional regulator | SALA_RS16490 | Not Available | + | 2664084 - 2664695 | 22420.6 |
| rna polymerase sigma factor | SALA_RS12885 | Not Available | + | 2664950 - 2665558 | 22881.2 |
| fecr domain-containing protein | SALA_RS12890 | Not Available | + | 2665555 - 2666544 | 35451.0 |
| tonb-dependent receptor | SALA_RS12895 | Q1CBU1 | + | 2666644 - 2669175 | 88921.2 |
| prolyl oligopeptidase family serine peptidase | SALA_RS12900 | Not Available | + | 2669187 - 2671367 | 79421.2 |
| hypothetical protein | SALA_RS17170 | Not Available | - | 2671375 - 2671518 | 5095.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.